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The raw sequence data reported in this study have been deposited in the Genome Sequence Archive in BIG Data Center, Beijing Institute of Genomics, Chinese Academy of Sciences (accession numbers CRA000080, CRA000079). They are publicly accessible at https://bigd.big.ac.cn/gsa. The assemblies for the plateau zokor and plateau pika have been deposited in the BIG Genome Warehouse (GWH) under project numbers GWHABJY00000000 and GWHABJX00000000. The RETSAT protein sequence alignment across 137 mammals has been uploaded to the Dryad Digital Repository (doi:10.5061/dryad.ttdz08kxg).
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We thank Zhengting Zou for modifying the computational program of convCalScript and Zhong-Ru Gu for his advice in genome assembly. This work was supported jointly and equally by the Second Tibetan Plateau Scientific Expedition and Research Program (2019QZKK0501) and the Strategic Priority Research Program of the Chinese Academy of Sciences (XDB13020400). This work was also supported by the National Natural Science Foundation of China (U1902216, 81772996, 81672764, 31621062, 31871270, 31922010, 31871277, 3190013), Science and Technology Department of Qinghai Province (Sanjiangyuan National Park Animal Genome Program), and Yunnan Applied Basic Research Projects (2016FA009, 2019FJ009). C.Y., S.P. and Z.L. were also supported by the Youth Innovation Promotion Association, CAS, and the Youth Talent Support Program of Yunnan Province (2019FI008).
The authors declare no competing interests.
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